Detailed information of matrix profile MA0047.3

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Profile summary
Name: FOXA2
Matrix ID: MA0047.3
Class: Fork head/winged helix factors
Family: FOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28644006
Uniprot ID: Q9Y261  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 66478 84100 9418 59170 7805 10179 6283 254489 4144 117443 52026 ]
C [ 56632 50527 2984 3603 2805 6484 2641 1890 236311 38538 63806 ]
G [ 53633 50576 3086 196969 3329 22429 9424 2037 2928 12432 34080 ]
T [ 85410 76950 246665 2411 248214 223061 243805 3737 18770 93740 112241 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0047.1 MA0047 1 Foxa2 Rattus norvegicus
FOX Fork head/winged helix factors
MA0047.2 MA0047 2 Foxa2 Mus musculus
FOX Fork head/winged helix factors
MA0047.3 MA0047 3 FOXA2 Homo sapiens
FOX Fork head/winged helix factors
MA0047.4 MA0047 4 FOXA2 Homo sapiens
FOX Fork head/winged helix factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0036.2

ChIP-seq Centrality
-log(P-value): 59252.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0036.2

ChIP-seq Centrality
-log(P-value): 48436.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: