Detailed information of matrix profile MA0048.2

Profile summary

Name: NHLH1
Matrix ID: MA0048.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8289804
Uniprot ID: Q02575  
Pazar TF: TF0000030
TFBSshape ID:
TFencyclopedia IDs: 773
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 788 461 3 2166 0 96 0 2 296 308 ]
C [ 2166 179 2166 3 301 2166 4 4 2166 736 ]
G [ 181 2166 0 1 2166 124 4 2166 102 2166 ]
T [ 111 142 0 0 114 0 2166 1 350 1489 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.