Detailed information of matrix profile MA0071.1

Profile summary

Name: RORA
Matrix ID: MA0071.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 7926749
Uniprot ID: P35398  
Pazar TF: TF0000047
TFBSshape ID: 71
TFencyclopedia IDs: 340
Source:
Comment: isoform type

Sequence logo

Frequency matrix

A [ 15 9 6 11 21 0 0 0 0 25 ]
C [ 1 1 12 2 0 0 0 0 25 0 ]
G [ 2 0 4 5 4 25 25 0 0 0 ]
T [ 7 15 3 7 0 0 0 25 0 0 ]

Binding sites information

TFBS profiles