Detailed information of matrix profile MA0079.2

Profile summary

Name: SP1
Matrix ID: MA0079.2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus Rattus norvegicus Homo sapiens
Data Type: COMPILED
Validation: 17916232
Uniprot ID: P08047  
Pazar TF: TF0000055
TFBSshape ID:
TFencyclopedia IDs: 841
Source:
Comment: Annotations from PAZAR SP1 + SP1_MOUSE + SP1_HUMAN + SP1_RAT in the pleiades genes project (TF0000105, TF0000121, TF0000137, TF0000146).

Sequence logo

Frequency matrix

A [ 0 0 0 4 2 0 1 0 6 3 ]
C [ 32 30 35 27 5 28 31 24 25 26 ]
G [ 1 1 0 0 15 1 0 3 0 3 ]
T [ 2 4 0 4 13 6 3 8 4 3 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.