Detailed information of matrix profile MA0080.4

Profile summary

Name: SPI1
Matrix ID: MA0080.4
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17916232
Uniprot ID: P17947  
Pazar TF: TF0000056
TFBSshape ID:
TFencyclopedia IDs: 518
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 3946 4976 5053 5044 4868 49 1793 29 0 5105 5122 0 21 2535 ]
C [ 555 26 2 0 4 246 4068 1 1 2 1 184 69 288 ]
G [ 1142 377 8 0 15 5255 727 5300 5330 0 1 5246 12 733 ]
T [ 476 82 30 99 524 2 1 2 0 1 5 1 4962 1439 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.