Detailed information of matrix profile MA0112.4

  1. Home
  2. Matrix > MA0112.4

Profile summary
Name: ESR1
Matrix ID: MA0112.4
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19339991
Uniprot ID: P03372  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 502 0 0 0 0 510 13 65 23 0 2 549 0 34 0 ]
C [ 7 0 2 1 632 1 284 340 53 30 0 3 638 623 206 ]
G [ 143 455 460 1 0 23 88 223 338 0 452 0 0 0 6 ]
T [ 0 15 0 491 2 0 235 127 108 471 1 0 2 0 402 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0112.1 MA0112 1 ESR1 Xenopus laevis
Xenopus tropicalis
Gallus gallus
Homo sapiens
Bos taurus
Oryctolagus cuniculus
Mus musculus
Rattus norvegicus
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0112.2 MA0112 2 ESR1 Homo sapiens
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0112.3 MA0112 3 ESR1 Homo sapiens
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0112.4 MA0112 4 ESR1 Homo sapiens
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: