Detailed information of matrix profile MA0114.3

Profile summary

Name: Hnf4a
Matrix ID: MA0114.3
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12385991
Uniprot ID: P49698  
Pazar TF: TF0000371
TFBSshape ID:
TFencyclopedia IDs: 185
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 1870 1624 6 211 148 1 5162 5162 5162 0 0 129 0 4452 2148 1019 ]
C [ 587 23 0 14 66 5162 2 0 0 1 5 5162 5162 35 1109 1064 ]
G [ 3292 3538 5162 5162 564 5 159 69 52 5162 7 131 4 709 1121 906 ]
T [ 467 5 1 711 5162 122 0 11 0 3 5162 962 191 135 784 2174 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.