Detailed information of matrix profile MA0115.1

Profile summary

Name: NR1H2::RXRA
Matrix ID: MA0115.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 10187832
Uniprot ID: P55055   P19793  
Pazar TF: TF0000080
TFBSshape ID: 110
TFencyclopedia IDs: 314 343
Source:
Comment: heterodimer between NR1H2 and RXR

Sequence logo

Frequency matrix

A [ 17 17 20 0 0 0 0 25 24 25 0 0 0 0 25 20 0 ]
C [ 5 1 0 0 0 0 25 0 0 0 0 0 0 25 0 1 15 ]
G [ 0 5 5 25 24 0 0 0 0 0 25 25 0 0 0 2 6 ]
T [ 3 2 0 0 1 25 0 0 1 0 0 0 25 0 0 2 4 ]

Binding sites information

TFBS profiles