Detailed information of matrix profile MA0548.3

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Profile summary
Name: AGL15
Matrix ID: MA0548.3
Class: MADS box factors
Family: Type II
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 12743119
Uniprot ID: Q38847  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 88 38 196 14 0 251 434 584 433 373 269 164 3 486 575 513 ]
C [ 29 5 28 585 473 168 31 0 4 53 50 0 0 21 3 5 ]
G [ 7 13 50 0 1 42 45 8 0 85 80 435 596 8 5 33 ]
T [ 475 543 325 0 125 138 89 7 162 88 200 0 0 84 16 48 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0548.1 MA0548 1 AGL15 Arabidopsis thaliana
MIKC MADS box factors
MA0548.2 MA0548 2 AGL15 Arabidopsis thaliana
MIKC MADS box factors
MA0548.3 MA0548 3 AGL15 Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: