Detailed information of matrix profile MA0573.1

Profile summary

Name: ATHB-9
Matrix ID: MA0573.1
Class: Homeo domain factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 9747806
Uniprot ID: O04292  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 4 5 5 3 0 0 25 26 0 0 26 0 0 17 0 5 2 0 0 ]
C [ 2 3 4 8 1 6 0 0 0 0 0 0 0 0 25 1 6 3 5 ]
G [ 1 3 2 2 25 0 1 0 0 26 0 0 3 9 1 4 0 4 3 ]
T [ 2 3 5 5 0 20 0 0 26 0 0 26 23 0 0 7 4 3 0 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.

External links