Detailed information of matrix profile MA0632.2

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Profile summary
Name: TCFL5
Matrix ID: MA0632.2
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15585666
Uniprot ID: Q9UL49  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 8670 25921 635 0 15451 0 1643 9359 0 36854 ]
C [ 5747 19096 4594 72543 0 72543 0 29710 0 22297 ]
G [ 47538 44394 72543 657 57092 0 72543 0 72543 10582 ]
T [ 10588 72543 1593 3520 1765 1566 0 72543 0 2810 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0632.1 MA0632 1 Tcfl5 Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
MA0632.2 MA0632 2 TCFL5 Homo sapiens
PAS domain factors Basic helix-loop-helix factors (bHLH)
MA0632.3 MA0632 3 TCFL5 Homo sapiens
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: