Detailed information of matrix profile MA0652.1

Profile summary

Name: IRF8
Matrix ID: MA0652.1
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21731497
Uniprot ID: Q02556  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 702
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 1309 63 3 5878 5878 5878 54 6 0 5878 5878 5878 11 321 ]
C [ 1996 5878 0 2 0 0 5878 5878 0 0 0 5 5878 1454 ]
G [ 571 19 5878 0 0 0 580 0 5878 3 2 0 1061 8 ]
T [ 2002 884 2 0 33 3 6 1228 0 0 68 0 15 5878 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.