Detailed information of matrix profile MA0653.1

Profile summary

Name: IRF9
Matrix ID: MA0653.1
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21731497
Uniprot ID: Q00978  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 705
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 3467 2392 49 43 3467 3467 3467 43 16 2 3467 3467 3467 4 99 ]
C [ 52 498 3467 3 5 0 2 3467 3467 0 2 1 0 3467 1129 ]
G [ 43 204 33 3467 1 0 0 197 0 3467 0 0 0 239 7 ]
T [ 110 1076 118 5 0 3 1 9 831 1 0 21 3 2 2338 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.