Detailed information of matrix profile MA0686.2

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Profile summary
Name: SPDEF
Matrix ID: MA0686.2
Class: Tryptophan cluster factors
Family: Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23449978
Uniprot ID: O95238  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 4628 66 4628 2 8 0 1 0 77 912 ]
C [ 28 4628 11 6 4628 4628 1 92 536 176 ]
G [ 1345 601 69 0 0 2 4628 4628 2737 101 ]
T [ 58 1566 532 4628 6 2 237 52 1890 4628 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0686.1 MA0686 1 SPDEF Homo sapiens
Ets-related Tryptophan cluster factors
MA0686.2 MA0686 2 SPDEF Homo sapiens
Ets-related Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: