Detailed information of matrix profile MA0725.1

Profile summary

Name: VSX1
Matrix ID: MA0725.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: Q9NZR4  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 991
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 756 1836 13572 13572 172 898 13572 2626 ]
C [ 8453 3131 626 154 199 761 516 3555 ]
G [ 561 572 553 172 103 984 3337 3658 ]
T [ 5119 13572 554 90 13572 13572 1372 3732 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.