Detailed information of matrix profile MA0743.1

Profile summary

Name: SCRT1
Matrix ID: MA0743.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10518212 11274425
Uniprot ID: Q9BWW7  
Pazar TF: TF0000736
TFBSshape ID:
TFencyclopedia IDs: 996
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 472 452 30 7 1046 1071 1 1075 190 0 0 154 139 187 269 ]
C [ 167 203 40 1447 35 0 1501 0 3 0 3 42 217 302 317 ]
G [ 574 89 1400 3 0 0 0 0 1461 1629 2 1302 1034 298 118 ]
T [ 111 410 519 20 24 0 0 0 5 2 1136 255 502 467 524 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.