Detailed information of matrix profile MA0867.1

Profile summary

Name: SOX4
Matrix ID: MA0867.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12920151
Uniprot ID: Q06945  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 138 547 547 0 547 547 0 0 54 0 547 0 0 1 0 2 ]
C [ 69 0 0 547 0 0 0 0 39 547 0 0 0 0 1 1 ]
G [ 258 0 5 0 1 3 1 11 398 0 1 547 4 547 0 1 ]
T [ 81 0 0 0 0 1 547 547 149 0 0 25 547 0 547 547 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links