Detailed information of matrix profile MA0877.2

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Profile summary
Name: BARHL1
Matrix ID: MA0877.2
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q9BZE3  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1151 259 2008 2114 0 1232 4725 718 ]
C [ 1508 4725 0 662 0 275 0 1280 ]
G [ 1001 0 4725 199 55 65 0 1889 ]
T [ 1065 622 0 4725 4725 4725 193 837 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0877.1 MA0877 1 Barhl1 Mus musculus
NK Homeo domain factors
MA0877.2 MA0877 2 BARHL1 Homo sapiens
NK Homeo domain factors
MA0877.3 MA0877 3 BARHL1 Homo sapiens
NK Homeo domain factors
MA0877.4 MA0877 4 BARHL1 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: