Detailed information of matrix profile MA0994.2

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Profile summary
Name: ERF8
Matrix ID: MA0994.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 9756931 9756931
Uniprot ID: Q9MAI5  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 154 163 230 64 39 87 14 7 31 4 9 57 36 99 414 130 180 201 ]
C [ 321 354 109 321 674 11 667 728 0 714 728 5 252 491 33 273 286 125 ]
G [ 93 58 213 90 9 537 46 2 701 9 3 649 29 50 180 91 79 222 ]
T [ 175 168 191 268 21 108 16 6 11 16 3 32 426 103 116 249 198 195 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0994.1 MA0994 1 ERF8 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0994.2 MA0994 2 ERF8 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0994.3 MA0994 3 ERF8 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     

-log(P-value) = 242.617

TFFM details

TFFM ID: TFFM0813.1

ChIP-seq Centrality
-log(P-value): 216.38

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0813.1

ChIP-seq Centrality
-log(P-value): 189.771

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: