Detailed information of matrix profile MA1020.1

Profile summary

Name: GT-1
Matrix ID: MA1020.1
Class: Helix-Turn-Helix
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 10437822
Uniprot ID: Q9FX53  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

A [ 0 0 30 999 971 30 0 624 ]
C [ 150 67 0 0 29 970 939 167 ]
G [ 649 0 0 0 0 0 0 125 ]
T [ 200 932 970 0 0 0 61 84 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.

External links