Detailed information of matrix profile MA1054.2

  1. Home
  2. Matrix > MA1054.2

Profile summary
Name: ARALYDRAFT_897773
Matrix ID: MA1054.2
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis lyrata subsp. lyrata
Data Type: PBM
Validation: 21241251
Uniprot ID: D7L3Y2  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 67 4 1 2 22 9 19 83 402 ]
C [ 6 132 2 47 7 826 957 877 491 ]
G [ 907 2 995 949 215 125 7 4 79 ]
T [ 20 862 1 2 756 40 17 36 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1054.1 MA1054 1 ARALYDRAFT_897773 Arabidopsis lyrata subsp. lyrata
TCP Basic helix-loop-helix factors (bHLH)
MA1054.2 MA1054 2 ARALYDRAFT_897773 Arabidopsis lyrata subsp. lyrata
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: