Detailed information of matrix profile MA1069.1

Profile summary

Name: TGA6
Matrix ID: MA1069.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 8487298
Uniprot ID: Q39140  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

A [ 210 428 0 0 1000 0 0 0 277 665 ]
C [ 210 211 0 0 0 1000 0 0 599 98 ]
G [ 330 209 0 1000 0 0 1000 0 84 138 ]
T [ 251 152 1000 0 0 0 0 1000 40 98 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.

External links