Detailed information of matrix profile MA1105.2

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Profile summary
Name: GRHL2
Matrix ID: MA1105.2
Class: Grainyhead domain factors
Family: Grainyhead-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20978075
Uniprot ID: Q6ISB3  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 13946 17515 36906 36921 625 1247 5826 320 1260 1618 6264 8493 ]
C [ 10536 7961 1220 748 39624 37226 485 609 2841 2646 10776 9161 ]
G [ 8528 9341 2000 2331 987 581 1543 40446 712 1147 6996 9741 ]
T [ 8868 7061 1752 1878 642 2824 34024 503 37065 36467 17842 14483 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1105.1 MA1105 1 GRHL2 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
MA1105.2 MA1105 2 GRHL2 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
MA1105.3 MA1105 3 GRHL2 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
     

-log(P-value) = 2122.59

TFFM details

TFFM ID: TFFM0138.2

ChIP-seq Centrality
-log(P-value): 18530.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0138.2

ChIP-seq Centrality
-log(P-value): 4375.95

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: