Detailed information of matrix profile MA1149.1

Profile summary

Name: RARA::RXRG
Matrix ID: MA1149.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 10698945
Uniprot ID: P10276   P48443  
Pazar TF: TF0000449
TFBSshape ID:
TFencyclopedia IDs:
Source: 28092692
Comment:

Sequence logo

Frequency matrix

A [ 345 496 13 11 5 18 874 272 215 211 344 348 495 26 12 60 73 702 ]
C [ 113 38 3 3 15 831 5 239 249 212 199 133 90 4 5 112 696 53 ]
G [ 413 460 954 828 71 58 111 154 320 272 231 397 390 927 815 226 97 206 ]
T [ 129 6 30 158 909 93 10 334 215 305 227 121 25 43 169 601 135 40 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.