Detailed information of matrix profile MA1161.1

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Profile summary
Name: TSO1
Matrix ID: MA1161.1
Class: CPP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LUI3  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 0 0 5 195 264 253 20 15 1 37 125 195 174 130 85 ]
C [ 0 0 45 0 0 3 0 16 35 41 15 9 8 28 28 ]
G [ 0 0 0 69 0 8 0 1 0 26 38 6 11 9 15 ]
T [ 264 264 214 0 0 0 244 232 228 160 86 54 71 97 136 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1161.1 MA1161 1 TSO1 Arabidopsis thaliana
CPP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: