Detailed information of matrix profile MA1167.1

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Profile summary
Name: EFM
Matrix ID: MA1167.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9ZQ85  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 149 155 31 401 598 0 600 0 52 0 49 ]
C [ 166 149 12 34 0 0 0 0 4 600 229 ]
G [ 79 158 529 70 1 110 0 0 0 0 6 ]
T [ 206 138 28 95 1 490 0 600 544 0 316 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1167.1 MA1167 1 EFM Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1167.2 MA1167 2 EFM Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0250.1

ChIP-seq Centrality
-log(P-value): 23525.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0250.1

ChIP-seq Centrality
-log(P-value): 23659.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: