Detailed information of matrix profile MA1174.1

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Profile summary
Name: MYB56
Matrix ID: MA1174.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q6R053  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 295 323 207 334 0 122 0 0 0 596 131 147 158 280 201 ]
C [ 37 25 13 2 457 417 0 0 0 0 45 103 71 78 114 ]
G [ 135 58 143 41 0 35 600 0 0 3 91 80 106 73 49 ]
T [ 133 194 237 223 143 26 0 600 600 1 333 270 265 169 236 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1174.1 MA1174 1 MYB56 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1174.2 MA1174 2 MYB56 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0365.1

ChIP-seq Centrality
-log(P-value): 1558.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0365.1

ChIP-seq Centrality
-log(P-value): 1518.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: