Detailed information of matrix profile MA1186.1

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Profile summary
Name: YAB4
Matrix ID: MA1186.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9M9A3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 179 260 235 0 599 1 521 569 15 233 218 155 262 235 174 ]
C [ 24 47 4 0 0 0 0 0 67 31 31 54 63 62 84 ]
G [ 202 49 279 599 0 0 54 12 428 321 20 65 112 103 152 ]
T [ 194 243 81 0 0 598 24 18 89 14 330 325 162 199 189 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1186.1 MA1186 1 YAB4 Arabidopsis thaliana
Myb-related Tryptophan cluster factors
MA1186.2 MA1186 2 YAB4 Arabidopsis thaliana
MYB-related Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0237.1

ChIP-seq Centrality
-log(P-value): 20858.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0237.1

ChIP-seq Centrality
-log(P-value): 20224.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: