Detailed information of matrix profile MA1189.1

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Profile summary
Name: AT5G61620
Matrix ID: MA1189.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FKF9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 306 308 89 91 34 15 599 0 0 0 421 282 371 256 163 ]
C [ 62 35 191 310 53 9 0 0 599 503 6 112 10 68 149 ]
G [ 52 71 55 47 0 16 0 0 0 0 58 30 10 18 82 ]
T [ 179 185 264 151 512 559 0 599 0 96 114 175 208 257 205 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1189.1 MA1189 1 AT5G61620 Arabidopsis thaliana
Myb-related Tryptophan cluster factors
MA1189.2 MA1189 2 AT5G61620 Arabidopsis thaliana
MYB-related Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0281.1

ChIP-seq Centrality
-log(P-value): 9457.29

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0281.1

ChIP-seq Centrality
-log(P-value): 8750.27

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: