Detailed information of matrix profile MA1194.1

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Profile summary
Name: AT3G10580
Matrix ID: MA1194.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 94 77 9 20 1 3 136 0 8 11 52 53 73 46 29 ]
C [ 12 0 53 97 1 0 0 0 132 76 11 30 2 31 33 ]
G [ 22 0 37 6 0 0 0 1 0 5 12 14 4 2 14 ]
T [ 12 63 41 17 138 137 4 139 0 48 65 43 61 61 64 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1194.1 MA1194 1 AT3G10580 Arabidopsis thaliana
Myb-related Tryptophan cluster factors
MA1194.2 MA1194 2 AT3G10580 Arabidopsis thaliana
MYB-related Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: