Detailed information of matrix profile MA1213.2

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Profile summary
Name: ZHD3
Matrix ID: MA1213.2
Class: Homeo domain factors
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11247607 11247607
Uniprot ID: O64722  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3101 2368 928 7271 7418 34 5843 7439 54 213 944 2703 2478 ]
C [ 943 1964 5524 67 29 14 247 8 5 26 189 784 1101 ]
G [ 1209 824 148 30 11 7 247 19 23 133 5659 1751 1041 ]
T [ 2244 2341 897 129 39 7442 1160 31 7415 7125 705 2259 2877 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1213.1 MA1213 1 ATHB-21 Arabidopsis thaliana
HD-ZIP::PLINC Homeo domain factors::Homeo domain factors
MA1213.2 MA1213 2 ZHD3 Arabidopsis thaliana
PLINC Homeo domain factors
MA1213.3 MA1213 3 ZHD3 Arabidopsis thaliana
PLINC Homeo domain factors
     

-log(P-value) = 5160.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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