Detailed information of matrix profile MA1225.1

  1. Home
  2. Matrix > MA1225.1

Profile summary
Name: ERF5
Matrix ID: MA1225.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: O80341  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 106 72 142 42 0 19 9 0 16 129 23 116 144 93 114 ]
C [ 219 29 17 465 0 20 503 0 32 370 5 72 180 14 38 ]
G [ 17 424 418 0 576 537 0 564 529 0 494 360 42 385 369 ]
T [ 238 55 3 73 4 4 68 16 3 81 58 32 214 88 59 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1225.1 MA1225 1 ERF5 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0336.1

ChIP-seq Centrality
-log(P-value): 214.086

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0336.1

ChIP-seq Centrality
-log(P-value): 228.406

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: