Detailed information of matrix profile MA1250.1

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Profile summary
Name: DREB2D
Matrix ID: MA1250.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9LQZ2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 172 133 107 6 0 2 1 0 31 221 93 114 129 90 109 ]
C [ 127 8 10 519 0 1 160 0 18 205 30 53 150 34 55 ]
G [ 21 395 366 0 556 554 0 551 489 13 360 340 73 340 334 ]
T [ 237 21 74 32 1 0 396 6 19 118 74 50 205 93 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1250.1 MA1250 1 DREB2D Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1250.2 MA1250 2 DREB2D Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: