Detailed information of matrix profile MA1252.2

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Profile summary
Name: ERF086
Matrix ID: MA1252.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q6J9Q2  
Source: 27203113
Comment: Also known as PUCHI

Sequence logo

Frequency matrix

         
A [ 61 39 59 0 1 8 2 3 13 8 ]
C [ 254 397 0 397 477 0 466 475 0 260 ]
G [ 37 0 256 61 0 469 1 0 459 11 ]
T [ 126 42 163 20 0 1 9 0 6 199 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1252.1 MA1252 1 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1252.2 MA1252 2 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: