Detailed information of matrix profile MA1267.2

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Profile summary
Name: DOF5.8
Matrix ID: MA1267.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9FGD6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 376 469 596 597 574 1 121 352 436 446 437 368 274 252 295 348 368 308 325 ]
C [ 86 1 0 0 1 10 107 27 25 35 32 26 32 62 37 33 41 42 49 ]
G [ 78 22 1 0 21 585 79 105 116 44 39 139 184 149 119 114 104 142 132 ]
T [ 57 105 0 0 1 1 290 113 20 72 89 64 107 134 146 102 84 105 91 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1267.1 MA1267 1 DOF5.8 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1267.2 MA1267 2 DOF5.8 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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