Detailed information of matrix profile MA1273.1

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Profile summary
Name: DOF4.2
Matrix ID: MA1273.1
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SUB1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 119 119 146 129 98 122 228 23 0 0 0 0 18 35 108 142 114 123 134 ]
C [ 120 119 105 50 72 70 28 463 598 0 0 0 0 48 166 145 108 96 106 ]
G [ 94 75 44 66 38 60 253 0 0 0 0 0 0 38 110 75 73 98 70 ]
T [ 265 285 303 353 390 346 89 112 0 598 598 598 580 477 214 236 303 281 288 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1273.1 MA1273 1 DOF4.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1273.2 MA1273 2 DOF4.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0324.1

ChIP-seq Centrality
-log(P-value): 386.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0324.1

ChIP-seq Centrality
-log(P-value): 362.472

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: