Detailed information of matrix profile MA1273.2

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Profile summary
Name: DOF4.2
Matrix ID: MA1273.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SUB1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 477 580 598 598 598 0 112 89 346 390 353 ]
C [ 38 0 0 0 0 0 0 253 60 38 66 ]
G [ 48 0 0 0 0 598 463 28 70 72 50 ]
T [ 35 18 0 0 0 0 23 228 122 98 129 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1273.1 MA1273 1 DOF4.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1273.2 MA1273 2 DOF4.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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