Detailed information of matrix profile MA1278.2

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Profile summary
Name: DOF3.4
Matrix ID: MA1278.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q39088  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 332 426 600 593 586 0 93 303 367 381 350 316 313 289 315 350 325 ]
C [ 104 0 0 0 0 0 157 43 17 69 70 51 62 74 34 62 42 ]
G [ 105 29 0 7 14 600 146 93 169 83 67 142 119 135 164 107 153 ]
T [ 59 145 0 0 0 0 204 161 47 67 113 91 106 102 87 81 80 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1278.1 MA1278 1 DOF3.4 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1278.2 MA1278 2 DOF3.4 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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