Detailed information of matrix profile MA1281.2

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Profile summary
Name: DOF5.1
Matrix ID: MA1281.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9LZ56  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 41 118 21 93 67 97 104 87 57 27 42 122 190 2 0 10 2 86 45 ]
C [ 140 110 104 73 103 96 149 80 99 58 104 71 82 511 49 0 1 13 90 ]
G [ 59 27 45 0 16 61 37 20 39 76 0 16 93 0 2 0 0 4 25 ]
T [ 275 260 345 349 329 261 225 328 320 354 369 306 150 2 464 505 512 412 355 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1281.1 MA1281 1 DOF5.1 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1281.2 MA1281 2 DOF5.1 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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