Detailed information of matrix profile MA1284.2

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Profile summary
Name: TCP1
Matrix ID: MA1284.2
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9FYG7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 4 0 0 0 0 8 0 0 9 52 15 ]
C [ 7 6 0 0 0 54 94 95 82 26 61 ]
G [ 84 5 95 95 95 8 1 0 0 8 2 ]
T [ 0 84 0 0 0 25 0 0 4 9 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1284.1 MA1284 1 TCP1 Arabidopsis thaliana
TCP Basic helix-loop-helix factors (bHLH)
MA1284.2 MA1284 2 TCP1 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: