Detailed information of matrix profile MA1293.1

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Profile summary
Name: MYB57
Matrix ID: MA1293.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q9SSA1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 271 300 355 496 113 0 0 595 0 0 0 555 256 269 ]
C [ 67 56 20 0 0 0 0 0 0 0 97 22 81 53 ]
G [ 88 108 127 57 483 0 0 0 597 597 0 20 151 199 ]
T [ 171 133 95 44 1 597 597 2 0 0 500 0 109 76 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1293.1 MA1293 1 MYB57 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1293.2 MA1293 2 MYB57 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0366.1

ChIP-seq Centrality
-log(P-value): 42254.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0366.1

ChIP-seq Centrality
-log(P-value): 41968.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: