Detailed information of matrix profile MA1298.1

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Profile summary
Name: WRKY29
Matrix ID: MA1298.1
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9SUS1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 189 23 0 0 0 593 0 17 103 89 100 ]
C [ 274 0 6 0 0 0 594 81 38 60 65 ]
G [ 64 439 0 1 594 1 0 0 15 42 114 ]
T [ 67 132 588 593 0 0 0 496 438 403 315 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1298.1 MA1298 1 WRKY29 Arabidopsis thaliana
WRKY GCM domain factors
MA1298.2 MA1298 2 WRKY29 Arabidopsis thaliana
WRKY GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0421.1

ChIP-seq Centrality
-log(P-value): 3437.04

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0421.1

ChIP-seq Centrality
-log(P-value): 3407.81

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: