Detailed information of matrix profile MA1301.1

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Profile summary
Name: WRKY33
Matrix ID: MA1301.1
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q8S8P5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 83 14 0 0 0 598 0 0 150 100 108 ]
C [ 350 0 0 0 0 0 598 122 28 35 49 ]
G [ 67 400 0 0 598 0 0 0 48 83 145 ]
T [ 98 184 598 598 0 0 0 476 372 380 296 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1301.1 MA1301 1 WRKY33 Arabidopsis thaliana
WRKY GCM domain factors
MA1301.2 MA1301 2 WRKY33 Arabidopsis thaliana
WRKY GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0423.1

ChIP-seq Centrality
-log(P-value): 11383.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0423.1

ChIP-seq Centrality
-log(P-value): 11201.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: