Detailed information of matrix profile MA1305.2

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Profile summary
Name: WRKY55
Matrix ID: MA1305.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9SHB5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 389 470 0 0 0 599 599 23 54 ]
C [ 48 1 0 0 599 0 0 543 59 ]
G [ 72 128 599 0 0 0 0 2 415 ]
T [ 90 0 0 599 0 0 0 31 71 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1305.1 MA1305 1 WRKY55 Arabidopsis thaliana
WRKY GCM domain factors
MA1305.2 MA1305 2 WRKY55 Arabidopsis thaliana
WRKY GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: