Detailed information of matrix profile MA1315.1

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Profile summary
Name: WRKY24
Matrix ID: MA1315.1
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9FFS3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 240 272 332 427 411 486 0 0 0 598 600 52 85 200 ]
C [ 101 103 78 36 27 0 0 1 600 0 0 525 50 158 ]
G [ 116 102 79 36 29 114 599 0 0 0 0 2 423 130 ]
T [ 143 123 111 101 133 0 1 599 0 2 0 21 42 112 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1315.1 MA1315 1 WRKY24 Arabidopsis thaliana
WRKY GCM domain factors
MA1315.2 MA1315 2 WRKY24 Arabidopsis thaliana
WRKY GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0417.1

ChIP-seq Centrality
-log(P-value): 20057.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0417.1

ChIP-seq Centrality
-log(P-value): 20124.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: