Detailed information of matrix profile MA1331.1

  1. Home
  2. Matrix > MA1331.1

Profile summary
Name: BEH4
Matrix ID: MA1331.1
Class: Basic helix-loop-helix factors (bHLH)
Family: BES/BZR
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15681342
Uniprot ID: Q9ZV88  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 93 54 388 0 596 0 0 0 0 0 270 ]
C [ 195 365 65 598 0 598 0 0 0 440 4 ]
G [ 119 88 132 0 0 0 598 0 598 1 324 ]
T [ 191 91 13 0 2 0 0 598 0 157 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1331.1 MA1331 1 BEH4 Arabidopsis thaliana
BES/BZR Basic helix-loop-helix factors (bHLH)
MA1331.2 MA1331 2 BEH4 Arabidopsis thaliana
BES/BZR Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0248.1

ChIP-seq Centrality
-log(P-value): 15437.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0248.1

ChIP-seq Centrality
-log(P-value): 15454.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: