Detailed information of matrix profile MA1337.1

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Profile summary
Name: BZIP44
Matrix ID: MA1337.1
Class: Basic leucine zipper factors (bZIP)
Family: Group S
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9680995
Uniprot ID: C0Z2L5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 50 6 103 0 525 0 8 0 49 500 1 68 283 164 145 ]
C [ 71 1 425 528 0 523 0 0 479 1 54 423 65 103 161 ]
G [ 79 397 0 0 1 1 520 0 0 24 320 5 37 51 66 ]
T [ 328 124 0 0 2 4 0 528 0 3 153 32 143 210 156 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1337.1 MA1337 1 BZIP44 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
MA1337.2 MA1337 2 BZIP44 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0306.1

ChIP-seq Centrality
-log(P-value): 8389.09

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0306.1

ChIP-seq Centrality
-log(P-value): 8389.09

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: