Detailed information of matrix profile MA1351.2

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Profile summary
Name: GBF3
Matrix ID: MA1351.2
Class: Basic leucine zipper factors (bZIP)
Family: Group G
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 9680995
Uniprot ID: P42776  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2745 2883 801 228 1454 131 9185 232 512 860 1799 ]
C [ 1879 1943 831 275 7410 9137 27 8749 340 636 2431 ]
G [ 1909 1756 400 8130 212 60 113 139 8349 509 4087 ]
T [ 2928 2879 7429 828 385 133 136 341 260 7456 1144 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1351.1 MA1351 1 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1351.2 MA1351 2 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1351.3 MA1351 3 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
     

-log(P-value) = 3912.52

TFFM details

TFFM ID: TFFM0846.1

ChIP-seq Centrality
-log(P-value): 11468.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0846.1

ChIP-seq Centrality
-log(P-value): 11885.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: