Detailed information of matrix profile MA1352.1

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Profile summary
Name: TRP1
Matrix ID: MA1352.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11278537
Uniprot ID: Q8L7L8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 8 7 285 11 5 15 1 1 7 300 4 4 1 0 2 3 275 48 13 27 42 ]
C [ 28 6 1 0 4 1 0 2 2 2 6 0 0 0 1 2 3 11 14 11 8 ]
G [ 8 4 8 272 292 288 0 9 2 2 296 290 302 0 0 0 0 218 263 250 4 ]
T [ 263 290 13 24 6 3 306 295 296 3 1 13 4 307 304 302 29 30 17 19 253 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1352.1 MA1352 1 TRP1 Arabidopsis thaliana
Myb-related Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0409.1

ChIP-seq Centrality
-log(P-value): 200.991

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0409.1

ChIP-seq Centrality
-log(P-value): 199.022

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: