Detailed information of matrix profile MA1358.2

  1. Home
  2. Matrix > MA1358.2

Profile summary
Name: bHLH130
Matrix ID: MA1358.2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q66GR3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 0 98 185 1 1 4 0 18 ]
C [ 184 87 0 184 0 0 0 105 ]
G [ 1 0 0 0 0 0 185 17 ]
T [ 0 0 0 0 184 181 0 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1358.1 MA1358 1 bHLH130 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1358.2 MA1358 2 bHLH130 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: